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水稻OsWRKY50介导盐胁迫响应的转录组分析

Transcriptome Analysis of OsWRKY50-mediated Salt Stress Response in Rice

  • 摘要: 盐胁迫是制约水稻生长发育的关键非生物胁迫因子,解析盐胁迫响应的分子机制对阐明植物耐盐调控网络及水稻育种具有重要意义。WRKY转录因子在植物逆境响应中发挥重要调控作用,但OsWRKY50在盐胁迫响应中的调控功能尚不清楚。本研究以OsWRKY50过表达株系(W50 OE)和野生型日本晴(Nip)为供试材料,利用RNA-Seq技术分析转录表达差异,结合GO功能注释与KEGG通路富集分析梳理潜在调控通路,同时采用RT-qPCR对部分差异表达基因(DEGs)进行验证。结果表明: W50 OE株系较野生型表现出更强的盐胁迫耐受性及更高的存活率。转录组分析显示,NaCl_Nip vs CK_Nip的比较组中鉴定到2250个DEGs,NaCl_W50 OE vs CK_W50 OE的比较组中鉴定到3463个DEGs。RT-qPCR验证结果与RNA-Seq的表达趋势一致。功能富集分析显示,两个比较组的差异富集通路主要涉及MAPK信号通路与苯丙素类生物合成途径。启动子W-box元件筛选结果显示,部分DEGs可能是OsWRKY50的潜在直接靶基因。OsWRKY50在转录水平上调控离子稳态、MAPK信号传导及次生代谢相关基因的表达,进而参与盐胁迫响应。研究结论可为深入探究其分子调控机制提供参考依据。

     

    Abstract: Salt stress is a major abiotic stress factor limiting rice growth and development. Elucidating salt stress-responsive molecular mechanisms is vital for clarifying the plant salt tolerance regulatory network and breeding salt-tolerant rice cultivars. WRKY transcription factors play key regulatory roles in plant stress responses. However, the specific regulatory network of OsWRKY50 in rice salt stress responses remains unclear. OsWRKY50 overexpression lines (W50 OE) and wild-type Nipponbare (Nip) were used as materials. RNA-Seq was performed to analyze transcriptional differences under different treatments. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses were conducted to identify potential regulatory pathways. Selected differentially expressed genes were further validated by RT-qPCR. The results showed that the W50 OE lines exhibited stronger salt stress tolerance and a higher survival rate. Transcriptome analysis revealed that a total of 2250 differentially expressed genes (DEGs) were identified in the NaCl_Nip vs CK_Nip comparison, while 3463 DEGs were identified in the NaCl_W50 OE vs CK_W50 OE comparison. RT-qPCR results were largely consistent with the RNASeq data. Functional enrichment analysis showed that these DEGs were mainly involved in MAPK signaling pathways, and phenylpropanoid biosynthesis. Promoter W-box element screening revealed that some DEGs may serve as potential target genes of OsWRKY50. OsWRKY50 regulates the expression of genes related to ion homeostasis, MAPK signaling and secondary metabolism at the transcriptional level, and participates in the salt stress response. The study provides a basis for further elucidating its molecular regulatory mechanisms.